| bayNorm: Bayesian gene expression recovery, imputation and normalisation for single cell RNA-sequencing data WT Tang, F Bertaux, P Thomas, C Stefanelli, M Saint, S Marguerat, ... Bioinformatics, 2019 | 126 | 2019 |
| Size-dependent increase in RNA polymerase II initiation rates mediates gene expression scaling with cell size XM Sun, A Bowman, M Priestman, F Bertaux, A Martinez-Segura, W Tang, ... Current Biology 30 (7), 1217-1230. e7, 2020 | 106 | 2020 |
| Maximum-likelihood inference of population size contractions from microsatellite data R Leblois, P Pudlo, J Néron, F Bertaux, C Reddy Beeravolu, R Vitalis, ... Molecular biology and evolution 31 (10), 2805-2823, 2014 | 79 | 2014 |
| Modeling dynamics of cell-to-cell variability in TRAIL-induced apoptosis explains fractional killing and predicts reversible resistance F Bertaux, S Stoma, D Drasdo, G Batt PLoS computational biology 10 (10), e1003893, 2014 | 72 | 2014 |
| Single-cell imaging and RNA sequencing reveal patterns of gene expression heterogeneity during fission yeast growth and adaptation M Sain, F Bertaux, W Tang, XM Sun, L Game, A Köferle, J Bähler, ... Nature microbiology, 2019 | 60 | 2019 |
| Division rate, cell size and proteome allocation: impact on gene expression noise and implications for the dynamics of genetic circuits F Bertaux, S Marguerat, V Shahrezaei Royal Society open science 5 (3), 172234, 2018 | 47 | 2018 |
| Enhancing bioreactor arrays for automated measurements and reactive control with ReacSight F Bertaux, S Sosa-Carrillo, V Gross, A Fraisse, C Aditya, M Furstenheim, ... Nature communications 13 (1), 3363, 2022 | 43 | 2022 |
| A light tunable differentiation system for the creation and control of consortia in yeast C Aditya, F Bertaux, G Batt, J Ruess Nature communications 12 (1), 5829, 2021 | 39 | 2021 |
| Model prediction and validation of an order mechanism controlling the spatiotemporal phenotype of early hepatocellular carcinoma S Hoehme, F Bertaux, W Weens, B Grasl-Kraupp, JG Hengstler, D Drasdo Bulletin of mathematical biology 80, 1134-1171, 2018 | 31 | 2018 |
| STL-based analysis of TRAIL-induced apoptosis challenges the notion of type I/type II cell line classification S Stoma, A Donzé, F Bertaux, O Maler, G Batt PLoS computational biology 9 (5), e1003056, 2013 | 30 | 2013 |
| Enabling reactive microscopy with MicroMator ZR Fox, S Fletcher, A Fraisse, C Aditya, S Sosa-Carrillo, J Petit, S Gilles, ... Nature Communications 13 (1), 2199, 2022 | 29 | 2022 |
| A bacterial size law revealed by a coarse-grained model of cell physiology F Bertaux, J von Kügelgen, S Marguerat, V Shahrezaei PLoS Computational Biology, 2020 | 29 | 2020 |
| Abstracting the Dynamics of Biological Pathways using Information Theory: A Case Study of Apoptosis Pathway SK Palaniappan, F Bertaux, M Pichene, E Fabre, G Batt, B Genest Bioinformatics, 2017 | 14 | 2017 |
| Using single-cell models to predict the functionality of synthetic circuits at the population scale C Aditya, F Bertaux, G Batt, J Ruess Proceedings of the National Academy of Sciences 119 (11), e2114438119, 2022 | 11 | 2022 |
| Maximizing protein production by keeping cells at optimal secretory stress levels using real-time control approaches S Sosa-Carrillo, H Galez, S Napolitano, F Bertaux, G Batt Nature Communications 14 (1), 3028, 2023 | 10 | 2023 |
| Growth-rate-dependent and nutrient-specific gene expression resource allocation in fission yeast IT Kleijn, A Martínez-Segura, F Bertaux, M Saint, H Kramer, V Shahrezaei, ... Life science alliance 5 (5), 2022 | 10 | 2022 |
| External control of microbial populations for bioproduction: A modeling and optimization viewpoint F Bertaux, J Ruess, G Batt Current Opinion in Systems Biology 28, 100394, 2021 | 9 | 2021 |
| Discrete Stochastic Abstraction of Biological Pathway Dynamics: A case study of the Apoptosis Pathway S Palaniappan, F Bertaux, M Pichene, E Fabre, G Batt, B Genest Bioinformatics 33 (13), 1980-1986, 2017 | 5 | 2017 |
| System modeling of receptor-induced apoptosis F Bertaux, D Drasdo, G Batt TRAIL, Fas Ligand, TNF and TLR3 in Cancer, 291-307, 2017 | 4 | 2017 |
| Fission yeast obeys a linear size law under nutrient titration F Bertaux, IT Kleijn, S Marguerat, V Shahrezaei microPublication Biology 2023, 2023 | 2 | 2023 |
Vahid ShahrezaeiProfessor of Biomathematics, Department of Mathematics, Imperial College LondonBestätigte E-Mail-Adresse bei imperial.ac.uk
