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Marco Pagni
Marco Pagni
VitaI-IT group, SIB Swiss Institute of Bioinformatics
Bestätigte E-Mail-Adresse bei sib.swiss
Titel
Zitiert von
Zitiert von
Jahr
The PROSITE database, its status in 2002
L Falquet, M Pagni, P Bucher, N Hulo, CJA Sigrist, K Hofmann, A Bairoch
Nucleic acids research 30 (1), 235-238, 2002
13312002
The InterPro database, an integrated documentation resource for protein families, domains and functional sites
R Apweiler, TK Attwood, A Bairoch, E Birney, M Biswas, P Bucher, ...
Nucleic acids research 29 (1), 37-40, 2001
12842001
The PROSITE database
N Hulo, A Bairoch, V Bulliard, L Cerutti, E De Castro, ...
Nucleic acids research 34 (suppl_1), D227-D230, 2006
11512006
PROSITE: a documented database using patterns and profiles as motif descriptors
CJA Sigrist, L Cerutti, N Hulo, A Gattiker, L Falquet, M Pagni, A Bairoch, ...
Briefings in bioinformatics 3 (3), 265-274, 2002
11472002
The InterPro Database, 2003 brings increased coverage and new features
NJ Mulder, R Apweiler, TK Attwood, A Bairoch, D Barrell, A Bateman, ...
Nucleic acids research 31 (1), 315-318, 2003
8902003
Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis
E Tisserant, M Malbreil, A Kuo, A Kohler, A Symeonidi, R Balestrini, ...
Proceedings of the National Academy of Sciences 110 (50), 20117-20122, 2013
8312013
A downstream mediator in the growth repression limb of the jasmonate pathway
Y Yan, S Stolz, A Chételat, P Reymond, M Pagni, L Dubugnon, EE Farmer
Science Signaling 19 (8), 2470, 2007
8062007
InterPro, progress and status in 2005
NJ Mulder, R Apweiler, TK Attwood, A Bairoch, A Bateman, D Binns, ...
Nucleic acids research 33 (suppl_1), D201-D205, 2005
7492005
InterPro—an integrated documentation resource for protein families, domains and functional sites
R Apweiler, TK Attwood, A Bairoch, E Birney, M Biswas, P Bucher, ...
Bioinformatics 16 (12), 1145-1150, 2000
3592000
Methylobacterium Genome Sequences: A Reference Blueprint to Investigate Microbial Metabolism of C1 Compounds from Natural and Industrial Sources
S Vuilleumier, L Chistoserdova, MC Lee, F Bringel, A Lajus, Y Zhou, ...
PloS one 4 (5), e5584, 2009
2702009
PDB_REDO: automated re-refinement of X-ray structure models in the PDB
RP Joosten, J Salzemann, V Bloch, H Stockinger, AC Berglund, ...
Applied Crystallography 42 (3), 376-384, 2009
2632009
MyHits: improvements to an interactive resource for analyzing protein sequences
M Pagni, V Ioannidis, L Cerutti, M Zahn-Zabal, CV Jongeneel, J Hau, ...
Nucleic acids research 35 (suppl_2), W433-W437, 2007
2602007
InterPro: an integrated documentation resource for protein families, domains and functional sites
InterPro Consortium, NJ Mulder, R Apweiler, TK Attwood, A Bairoch, ...
Briefings in bioinformatics 3 (3), 225-235, 2002
2062002
Automated annotation of microbial proteomes in SWISS-PROT
A Gattiker, K Michoud, C Rivoire, AH Auchincloss, E Coudert, T Lima, ...
Computational biology and chemistry 27 (1), 49-58, 2003
1912003
MetaNetX/MNXref–reconciliation of metabolites and biochemical reactions to bring together genome-scale metabolic networks
S Moretti, O Martin, T Van Du Tran, A Bridge, A Morgat, M Pagni
Nucleic acids research 44 (D1), D523-D526, 2016
1782016
The elusive roles of bacterial glutathione S-transferases: new lessons from genomes
S Vuilleumier, M Pagni
Applied microbiology and biotechnology 58, 138-146, 2002
1722002
MyHits: a new interactive resource for protein annotation and domain identification
M Pagni, V Ioannidis, L Cerutti, M Zahn-Zabal, CV Jongeneel, L Falquet
Nucleic acids research 32 (suppl_2), W332-W335, 2004
1412004
Soil fungal communities of grasslands are environmentally structured at a regional scale in the A lps
L Pellissier, H Niculita‐Hirzel, A Dubuis, M Pagni, N Guex, C Ndiribe, ...
Molecular ecology 23 (17), 4274-4290, 2014
1402014
Bacillus subtilis 168 gene lytF encodes a γ-D-glutamate-meso-diaminopimelate muropeptidase expressed by the alternative vegetative sigma factor, σD
P Margot, M Pagni, D Karamata
Microbiology 145 (1), 57-65, 1999
1401999
Organic substrate diffusibility governs microbial community composition, nutrient removal performance and kinetics of granulation of aerobic granular sludge
M Layer, A Adler, E Reynaert, A Hernandez, M Pagni, E Morgenroth, ...
Water research X 4, 100033, 2019
1382019
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