Personalized characterization of diseases using sample-specific networks X Liu, Y Wang, H Ji, K Aihara, L Chen Nucleic acids research 44 (22), e164-e164, 2016 | 274 | 2016 |
Identifying disease genes and module biomarkers by differential interactions X Liu, ZP Liu, XM Zhao, L Chen Journal of the American Medical Informatics Association 19 (2), 241-248, 2012 | 116 | 2012 |
Identifying critical transitions of complex diseases based on a single sample R Liu, X Yu, X Liu, D Xu, K Aihara, L Chen Bioinformatics 30 (11), 1579-1586, 2014 | 100 | 2014 |
Quantifying critical states of complex diseases using single-sample dynamic network biomarkers X Liu, X Chang, R Liu, X Yu, L Chen, K Aihara PLoS computational biology 13 (7), e1005633, 2017 | 97 | 2017 |
Detection for disease tipping points by landscape dynamic network biomarkers X Liu, X Chang, S Leng, H Tang, K Aihara, L Chen National Science Review 6 (4), 775-785, 2019 | 93 | 2019 |
Feature selection of gene expression data for cancer classification using double RBF-kernels S Liu, C Xu, Y Zhang, J Liu, B Yu, X Liu, M Dehmer BMC bioinformatics 19, 1-14, 2018 | 92 | 2018 |
Detecting early-warning signals of type 1 diabetes and its leading biomolecular networks by dynamical network biomarkers X Liu, R Liu, XM Zhao, L Chen BMC medical genomics 6, 1-10, 2013 | 82 | 2013 |
In vitro inhibition of postharvest pathogens of fruit and control of gray mold of strawberry and green mold of citrus by aureobasidin A X Liu, J Wang, P Gou, C Mao, ZR Zhu, H Li International Journal of Food Microbiology 119 (3), 223-229, 2007 | 80 | 2007 |
Diagnosing phenotypes of single-sample individuals by edge biomarkers W Zhang, T Zeng, X Liu, L Chen Journal of molecular cell biology 7 (3), 231-241, 2015 | 69 | 2015 |
The dynamics of DNA methylation covariation patterns in carcinogenesis AE Teschendorff, X Liu, H Caren, SM Pollard, S Beck, M Widschwendter, ... PLoS computational biology 10 (7), e1003709, 2014 | 64 | 2014 |
A network approach to predict pathogenic genes for Fusarium graminearum X Liu, WH Tang, XM Zhao, L Chen PloS one 5 (10), e13021, 2010 | 60 | 2010 |
A gene signature of survival prediction for kidney renal cell carcinoma by multi-omic data analysis F Hu, W Zeng, X Liu International journal of molecular sciences 20 (22), 5720, 2019 | 55 | 2019 |
Big-data-based edge biomarkers: study on dynamical drug sensitivity and resistance in individuals T Zeng, W Zhang, X Yu, X Liu, M Li, L Chen Briefings in bioinformatics 17 (4), 576-592, 2016 | 53 | 2016 |
Multicellular gene network analysis identifies a macrophage-related gene signature predictive of therapeutic response and prognosis of gliomas X Sun, X Liu, M Xia, Y Shao, XD Zhang Journal of translational medicine 17, 1-20, 2019 | 50 | 2019 |
Dynamical network biomarkers: Theory and applications K Aihara, R Liu, K Koizumi, X Liu, L Chen Gene 808, 145997, 2022 | 49 | 2022 |
Detecting the tipping points in a three-state model of complex diseases by temporal differential networks P Chen, Y Li, X Liu, R Liu, L Chen Journal of translational medicine 15, 1-15, 2017 | 42 | 2017 |
Ant intelligence for solving optimal path‐covering problems with multi‐objectives X Li, J He, X Liu International Journal of Geographical Information Science 23 (7), 839-857, 2009 | 41 | 2009 |
Whole-exome sequencing reveals recurrent somatic mutation networks in cancer X Liu, J Wang, L Chen Cancer letters 340 (2), 270-276, 2013 | 39 | 2013 |
DIPOS: database of interacting proteins in Oryza sativa A Sapkota, X Liu, XM Zhao, Y Cao, J Liu, ZP Liu, L Chen Molecular BioSystems 7 (9), 2615-2621, 2011 | 36 | 2011 |
Edge biomarkers for classification and prediction of phenotypes T Zeng, WW Zhang, XT Yu, XP Liu, MY Li, R Liu, LN Chen Science China Life Sciences 57, 1103-1114, 2014 | 34 | 2014 |