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Ning Zhang
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Changes in regeneration-responsive enhancers shape regenerative capacities in vertebrates
W Wang, CK Hu, A Zeng, D Alegre, D Hu, K Gotting, A Ortega Granillo, ...
Science 369 (6508), eaaz3090, 2020
1502020
Translation of small downstream ORFs enhances translation of canonical main open reading frames
Q Wu, M Wright, MM Gogol, WD Bradford, N Zhang, AA Bazzini
The EMBO journal 39 (17), e104763, 2020
812020
Divergent cytosine DNA methylation patterns in single‐cell, soybean root hairs
MS Hossain, T Kawakatsu, KD Kim, N Zhang, CT Nguyen, SM Khan, ...
New Phytologist 214 (2), 808-819, 2017
782017
P3DB 3.0: From plant phosphorylation sites to protein networks
Q Yao, H Ge, S Wu, N Zhang, W Chen, C Xu, J Gao, JJ Thelen, D Xu
Nucleic acids research 42 (D1), D1206-D1213, 2014
772014
Soybean roots grown under heat stress show global changes in their transcriptional and proteomic profiles
O Valdés-López, J Batek, N Gomez-Hernandez, CT Nguyen, ...
Frontiers in Plant Science 7, 517, 2016
652016
A family of negative regulators targets the committed step of de novo fatty acid biosynthesis
MJ Salie, N Zhang, V Lancikova, D Xu, JJ Thelen
The Plant Cell 28 (9), 2312-2325, 2016
562016
The methyltransferase SETD2 couples transcription and splicing by engaging mRNA processing factors through its SHI domain
S Bhattacharya, MJ Levy, N Zhang, H Li, L Florens, MP Washburn, ...
Nature communications 12 (1), 1443, 2021
422021
MU-LOC: a machine-learning method for predicting mitochondrially localized proteins in plants
N Zhang, RSP Rao, F Salvato, JF Havelund, IM Møller, JJ Thelen, D Xu
Frontiers in Plant Science 9, 364181, 2018
382018
Identification of soybean proteins and genes differentially regulated in near isogenic lines differing in resistance to aphid infestation
L Brechenmacher, THN Nguyen, N Zhang, TH Jun, D Xu, MAR Mian, ...
Journal of proteome research 14 (10), 4137-4146, 2015
342015
Enhanced lipogenesis through Pparγ helps cavefish adapt to food scarcity
S Xiong, W Wang, A Kenzior, L Olsen, J Krishnan, J Persons, K Medley, ...
Current Biology 32 (10), 2272-2280. e6, 2022
332022
Evidence for plant-derived xenomiRs based on a large-scale analysis of public small RNA sequencing data from human samples
Q Zhao, Y Liu, N Zhang, M Hu, H Zhang, T Joshi, D Xu
PloS one 13 (6), e0187519, 2018
322018
Differentiating enteric Escherichia coli from environmental bacteria through the putative glucosyltransferase gene (ycjM)
D Deng, N Zhang, A Mustapha, D Xu, T Wuliji, M Farley, J Yang, B Hua, ...
water research 61, 224-231, 2014
262014
CarbonylDB: A curated data-resource of protein carbonylation sites
R Rao, N Zhang, D Xu, IM Møller
Bioinformatics, 2018
192018
Genome-wide analysis of cis-regulatory changes underlying metabolic adaptation of cavefish
J Krishnan, CW Seidel, N Zhang, NP Singh, J VanCampen, R Peuß, ...
Nature genetics 54 (5), 684-693, 2022
18*2022
Improving degree-based variable ordering heuristics for solving constraint satisfaction problems
H Li, Y Liang, N Zhang, J Guo, D Xu, Z Li
Journal of Heuristics 22, 125-145, 2016
152016
Analysis of the siRNA-mediated gene silencing process targeting three homologous genes controlling soybean seed oil quality
S Lu, X Yin, W Spollen, N Zhang, D Xu, J Schoelz, K Bilyeu, ZJ Zhang
PLoS One 10 (6), e0129010, 2015
112015
Structural basis of the interaction between SETD2 methyltransferase and hnRNP L paralogs for governing co-transcriptional splicing
S Bhattacharya, S Wang, D Reddy, S Shen, Y Zhang, N Zhang, H Li, ...
Nature Communications 12 (1), 6452, 2021
102021
Exploring human diseases and biological mechanisms by protein structure prediction and modeling
J Wang, J Luttrell, N Zhang, S Khan, NQ Shi, MX Wang, JQ Kang, Z Wang, ...
Translational Biomedical Informatics: A Precision Medicine Perspective, 39-61, 2016
82016
Polymorphism of the glucosyltransferase gene (ycjM) in Escherichia coli and its use for tracking human fecal pollution in water
D Deng, N Zhang, D Xu, M Reed, F Liu, G Zheng
Science of the Total Environment 537, 260-267, 2015
82015
Elevated levels of the methyltransferase SETD2 causes transcription and alternative splicing changes resulting in oncogenic phenotypes
S Bhattacharya, D Reddy, N Zhang, H Li, JL Workman
Frontiers in Cell and Developmental Biology 10, 945668, 2022
7*2022
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