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TRAN Thuong Van Du
TRAN Thuong Van Du
SIB Swiss Institute of Bioinformatics
Bestätigte E-Mail-Adresse bei sib.swiss
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Zitiert von
Zitiert von
Jahr
Poly (ADP-ribose) prevents pathological phase separation of TDP-43 by promoting liquid demixing and stress granule localization
L McGurk, E Gomes, L Guo, J Mojsilovic-Petrovic, V Tran, RG Kalb, ...
Molecular cell 71 (5), 703-717. e9, 2018
3922018
MetaNetX/MNXref–reconciliation of metabolites and biochemical reactions to bring together genome-scale metabolic networks
S Moretti, O Martin, VDT Tran, A Bridge, A Morgat, M Pagni
Nucleic Acids Research 44 (D1), D523-D526, 2015
1822015
MetaNetX/MNXref: unified namespace for metabolites and biochemical reactions in the context of metabolic models
S Moretti, VDT Tran, F Mehl, M Ibberson, M Pagni
Nucleic acids research 49 (D1), D570-D574, 2021
1402021
RNA enrichment method for quantitative transcriptional analysis of pathogens in vivo applied to the fungus Candida albicans
S Amorim-Vaz, VDT Tran, S Pradervand, M Pagni, AT Coste, D Sanglard
mBio 6 (5), e00942-15, 2015
852015
Comparative Genomics of Two Sequential Candida glabrate Clinical Isolates
L Vale-Silva, E Beaudoing, VDT Tran, D Sanglard
G3: Genes, Genomes, Genetics, g3. 117.042887, 2017
722017
Persistence of Candida albicans in the Oral Mucosa Induces a Curbed Inflammatory Host Response That Is Independent of Immunosuppression
FR Kirchner, K Littringer, S Altmeier, VDT Tran, F Schönherr, C Lemberg, ...
Frontiers in immunology 10, 330, 2019
532019
miRBoost: boosting support vector machines for microRNA precursor classification
VDT Tran, S Tempel, B Zerath, F Zehraoui, F Tahi
RNA 21 (5), 775-785, 2015
532015
The SIB Swiss Institute of Bioinformatics’ resources: focus on curated databases
SIB Swiss Institute of Bioinformatics Members
Nucleic acids research 44 (D1), D27-D37, 2016
522016
RNA sequencing-based genome reannotation of the dermatophyte
VDT Tran, N De Coi, M Feuermann, E Schmid-Siegert, ET Bagut, ...
mSystems 1 (4), e00036-16, 2016
38*2016
Anti-adipogenic signals at the onset of obesity-related inflammation in white adipose tissue
T Caputo, VDT Tran, N Bararpour, C Winkler, G Aguileta, KB Trang, ...
Cellular and Molecular Life Sciences 78, 227-247, 2021
372021
Candida albicans commensalism in the oral mucosa is favoured by limited virulence and metabolic adaptation
C Lemberg, K Martinez de San Vicente, R Fróis-Martins, S Altmeier, ...
PLoS Pathogens 18 (4), e1010012, 2022
322022
Detection of generic differential RNA processing events from RNA-seq data
VDT Tran, O Souiai, N Romero-Barrios, M Crespi, D Gautheret
RNA biology 13 (1), 59-67, 2016
232016
An in vitro approach to understand contribution of kidney cells to human urinary extracellular vesicles
K Barreiro, AC Lay, G Leparc, VDT Tran, M Rosler, L Dayalan, F Burdet, ...
Journal of Extracellular Vesicles 12 (2), 12304, 2023
162023
Condition-specific series of metabolic sub-networks and its application for gene set enrichment analysis
VDT Tran, S Moretti, AT Coste, S Amorim-Vaz, D Sanglard, M Pagni
Bioinformatics 35 (13), 2258-2266, 2019
162019
A graph-theoretic approach for classification and structure prediction of transmembrane β-barrel proteins
VDT Tran, P Chassignet, S Sheikh, JM Steyaert
BMC genomics 13, 1-18, 2012
152012
In Silico Prediction of RNA Secondary Structure
F Tahi, VDT Tran, A Boucheham
Promoter Associated RNA: Methods and Protocols, 145-168, 2017
122017
Comparative genomics of two sequential Candida glabrata clinical isolates. G3 (Bethesda) 7: 2413–2426
L Vale-Silva, E Beaudoing, VDT Tran, D Sanglard
112017
Using in vivo transcriptomics and RNA enrichment to identify genes involved in virulence of Candida glabrata
S Schrevens, E Durandau, VDT Tran, D Sanglard
Virulence 13 (1), 1285-1303, 2022
102022
Prediction of permuted super-secondary structures in β-barrel proteins
VDT Tran, P Chassignet, JM Steyaert
Proceedings of the 2011 ACM Symposium on Applied Computing, 110-111, 2011
72011
Persistence of Candida albicans in the oral mucosa induces a curbed inflammatory host response that is independent of immunosuppression. Front Immunol. 2019; 10: 330
FR Kirchner, K Littringer, S Altmeier, VDT Tran, F Schonherr, C Lemberg
62019
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