The surprising creativity of digital evolution: A collection of anecdotes from the evolutionary computation and artificial life research communities J Lehman, J Clune, D Misevic, C Adami, L Altenberg, J Beaulieu, ... Artificial life 26 (2), 274-306, 2020 | 365 | 2020 |
Seaview version 5: a multiplatform software for multiple sequence alignment, molecular phylogenetic analyses, and tree reconciliation M Gouy, E Tannier, N Comte, DP Parsons Multiple sequence alignment: methods and protocols, 241-260, 2021 | 167 | 2021 |
In silico experimental evolution: a tool to test evolutionary scenarios B Batut, DP Parsons, S Fischer, G Beslon, C Knibbe BMC bioinformatics 14, 1-11, 2013 | 72 | 2013 |
Scaling laws in bacterial genomes: A side-effect of selection of mutational robustness? G Beslon, DP Parsons, Y Sanchez-Dehesa, JM Pena, C Knibbe Biosystems 102 (1), 32-40, 2010 | 45 | 2010 |
The complexity ratchet: Stronger than selection, stronger than evolvability, weaker than robustness V Liard, DP Parsons, J Rouzaud-Cornabas, G Beslon Artificial life 26 (1), 38-57, 2020 | 37 | 2020 |
Treerecs: an integrated phylogenetic tool, from sequences to reconciliations N Comte, B Morel, D Hasić, L Guéguen, B Boussau, V Daubin, S Penel, ... Bioinformatics 36 (18), 4822-4824, 2020 | 33 | 2020 |
Understanding and monitoring the evolution of the Covid-19 epidemic from medical emergency calls: the example of the Paris area S Gaubert, M Akian, X Allamigeon, M Boyet, B Colin, T Grohens, ... Comptes Rendus. Mathématique 358 (7), 843-875, 2020 | 21 | 2020 |
Effects of public good properties on the evolution of cooperation D Misevic, A Frénoy, DP Parsons, F Taddei Artificial Life Conference Proceedings, 218-225, 2012 | 19 | 2012 |
Importance of the Rearrangement Rates on the Organization of Genome Transcription. DP Parsons, C Knibbe, G Beslon ALife, 479-486, 2010 | 18 | 2010 |
From digital genetics to knowledge discovery: Perspectives in genetic network understanding G Beslon, DP Parsons, JM Pena, C Rigotti, Y Sanchez-Dehesa Intelligent Data Analysis 14 (2), 173-191, 2010 | 17 | 2010 |
Data standards for artificial life software A Lalejini, E Dolson, C Bohm, AJ Ferguson, DP Parsons, PF Rainford, ... Artificial Life Conference Proceedings, 507-514, 2019 | 12 | 2019 |
Of evolution, systems and complexity G Beslon, V Liard, DP Parsons, J Rouzaud-Cornabas Evolutionary Systems Biology: Advances, Questions, and Opportunities, 1-18, 2021 | 8 | 2021 |
What happened to my genes? Insights on gene family dynamics from digital genetics experiments C Knibbe Artificial Life Conference Proceedings, 33-40, 2014 | 8 | 2014 |
Homologous and nonhomologous rearrangements: Interactions and effects on evolvability. DP Parsons, C Knibbe, G Beslon ECAL, 622-629, 2011 | 7 | 2011 |
Sélection indirecte en évolution darwinienne: mécanismes et implications D Parsons INSA de Lyon, 2011 | 6 | 2011 |
How to reduce a genome? alife as a tool to teach the scientific method to school pupils Q Carde, M Foley, C Knibbe, DP Parsons, J Rouzaud-Cornabas, ... Artificial Life Conference Proceedings, 497-504, 2019 | 4 | 2019 |
An alife game to teach evolution of antibiotic resistance. G Beslon, B Batut, DP Parsons, D Schneider, C Knibbe ECAL, 43-50, 2013 | 3 | 2013 |
Parsimonious modeling of scaling laws in genomes and transcriptomes C Knibbe, DP Parsons, G Beslon ECAL 2011: The 11th European Conference on Artificial Life, 2011 | 3 | 2011 |
Scaling laws in digital organisms G Beslon, Y Sanchez-Dehesa, DP Parsons, JM Pena, C Knibbe Proc. Information Processing in Cells and Tissues IPCAT'09, 111-114, 2009 | 3 | 2009 |
Modelling evolution of regulatory networks in artificial bacteria Y Sanchez-Dehesa, D Parsons, JM Peña, G Beslon Mathematical Modelling of Natural Phenomena 3 (2), 27-66, 2008 | 3 | 2008 |